Dr. Neda Rafieiolhosseini
Data Scientist / Data Engineer
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01/2021-12/2021 |
Research AssistantBioinformatics and Computational Biophysics Group, Faculty of Biology, University of Duisburg-Essen, Essen, Germany Project title: Developing a Simulated Annealing Monte Carlo Approach to Predict Binding Sites of Large Ligand-Protein Complexes (DFG CRC 1093) |
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09/2019-12/2020 |
Researcher (Scholarship)Bioinformatics and Computational Biophysics Group, Faculty of Biology, University of Duisburg-Essen, Essen, Germany Project title: Developing a Simulated Annealing Monte Carlo Approach to Predict Binding Sites of Large Ligand-Protein Complexes Developing and implementing a computer code with Julia and Python Analyzing, clustering, and visualizing the simulated data with R GrantsDAAD One-Year Research Grant (09.2019 - 06.2020) University of Duisburg-Essen Research Grant (07.2020 - 12.2020) |
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10/2017-05/2018 |
ResearcherCondensed Matter and Statistical Physics Group, Abdus Salam International Center for Theoretical Physics (ICTP), Trieste, Italy Project title: Investigating the interaction of silica and amyloid beta peptide. Implementation of molecular dynamics simulations on computer clusters Analyzing the obtained data with MATLAB |
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02/2022-06/2022 |
Vocational Training in Data ScienceWBS Coding School, Berlin, Germany |
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10/2015-03/2021 |
Ph.D. in Computational PhysicsSchool of Nano, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran Thesis Title: “Investigating thermal properties of cell membrane with different compositions”. Download Thesis GPA: 17.63 out of 20 |
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10/2012-06/2015 |
M.Sc. in Biomedical Engineering (Bioelectric)Medical Physics and Biomedical Engineering Group, Shahid Beheshti University of Medical Sciences, Tehran, Iran Thesis Title: “Analytical investigation of ultra-weak photon emission and possibility study of early diagnosis based on their statistical features”. Download Thesis GPA: 18.31 out of 20.0 (First Class Honors) |
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10/2007-02/2012 |
B.Sc. in Biomedical Engineering (Bioelectric)Biomedical Engineering Group, University of Esfahan, Esfahan, Iran Thesis Title: “Simulation of a Wireless Neuro-Stimulator and Design and Implementation of a Neural Recorder”. GPA: 15.63 out of 20.0 |
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06/2006 |
High School Diploma in Mathematics and PhysicsCumulative Average: 19.86 out of 20.0 |
Rafieiolhosseini, Neda, et al.
Beilstein Archives 2021.1 (2021): 11.
Alexander Höing, et al.
Angewandte Chemie
Rafieiolhosseini, Neda; Ejtehadi, Mohammad Reza.
Physical Review E 102.4 (2020): 042401.
Rafieiolhosseini, Neda, et al.
Journal of Photochemistry and Photobiology B: Biology 162 (2016): 50-55.
Rafii-Tabar, Hashem, and Neda Rafieiolhosseini.
Iranian Journal of Medical Physics 12.3 (2015): 137-144.
F. Keyvanfard, L. Shahshahani,
N. Rafieiolhosseini, M. Kafaee.
Amirkabir University of Technology Publication
Joint QLS-CMSP Virtual Summer Retreat on Heat, Water, Noise, and Life. ICTP, Italy, 2020.
Conference on Atomistic Simulations of Biomolecules : towards a Quantitative Understanding of Life Machinery. Trieste, Italy, 2017.
11th Iranian Conference of Medical Physics. Teheran, Iran, 2013.
Programming Languages |
Python, Julia, MATLAB, R |
Database |
SQL, MySQL Server, MySQL Workbench |
Data Science Tools |
Machine Learning, Recommender Systems, Computer Vision, Artificial Neural Networks, Pandas, Tableau, scikit-learn, Matplotlib |
Molecular Dynamics Simulation Packages |
GROMACS, LAMMPS, VMD, PyMOL |
Internet Technologies |
HTML, CSS |
Tools |
Git, VS Code, Linux, Linux Bash Scripting |
English |
Proficient userIELTS Academic Certificate (overall score of 7.0 out of 9.0) (2016) TOEFL IBT Certificate (overall score of 91 out of 120) (2012) |
German |
Business fluent |
Persian |
Native speaker |
